Welcome to Metagenomic-DeepFRI’s documentation!

Do you have thousands of protein sequences with unknown structures, but still want to know their molecular function, biological process, cellular component and enzyme commission predicted by DeepFRI? Metagenomic-DeepFRI is a deep learning-based software for functional annotation of metagenomes. It combines both protein sequence and structure information for function prediction. It is a joint project of the Systems Biology Research Group, Center for Computational Biology, Flatiron Institute, New York, USA and Structural and Functional Genomics Lab, Małopolska Center of Biotechnology UJ, Krakow, Poland.

Hey, want to contribute to the project and become a co-author?

Contribute to our code and help us improve it! Or present us your use-case, show benefits and pitfalls (additional points for benchmarking against other software).

Intereseted? Refer to contributions section for more information.